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International Leadership Charter High School
New York, NY | Full Time
$136k-182k (estimate)
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Bioinformatics Data Manager
$118k-158k (estimate)
Full Time | Public Administration
1 Week Ago
LHI Group is Hiring a Bioinformatics Data Manager Near New York, NY
Job Details
We are currently partered with an amazing non-profit, based in New York, who need to hire a Data Manager.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
Data releases
Education
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
Data releases
- Maintain the Bioinformatics quality control pipeline, used to verify consistency with phenotypic data and ensure the integrity of released genomic data
- Execute existing variant calling pipelines, which will be included in data releases
- Package whole-exome and whole-genome data for regular curated and rapid releases
- Manage ad hoc genetic data releases for various cohorts and datasets
- Coordinate data receipt from external investigators, vendors, and research groups
- Perform incoming data cleaning, including deidentifying sample identifiers, organizing data files, and ensuring consistent metadata
- Manage the organization of raw, cleaned, and released data on our local cluster environment
- Harmonize our large collection of heterogeneous datasets hosted on our Base
- Support data sharing for investigators and collaborations
- Respond promptly to dataset questions from external investigators
- Support data access for cloud platforms
Education
- B.S. or M.S. in data science, bioinformatics, or a related discipline
- At least 4 years' relevant work experience
- Extensive experience with Linux/bash
- Experience working in an HPC environment
- Experience with Python
- Experience with version control using git / GitHub
- Basic skills in data analysis and statistics
- Strong organizational skills and outstanding attention to detail
- Effective oral and written communicator
- Ability to thrive in collaborative environments
- Enthusiasm for open science and collaboration
- Experience with genomics data processing and analysis
- Experience writing technical documentation
- Experience with cloud storage solutions (AWS, Google Cloud, Terra)
- Working knowledge of SQL
- Familiarity with data privacy and security regulations in the healthcare or research domain
Job Summary
JOB TYPE
Full Time
INDUSTRY
Public Administration
SALARY
$118k-158k (estimate)
POST DATE
05/10/2024
EXPIRATION DATE
07/09/2024
WEBSITE
lhi.org
HEADQUARTERS
BROCKTON, MA
SIZE
100 - 200
TYPE
Private
CEO
ANDREA KINGMAN
REVENUE
$10M - $50M
INDUSTRY
Public Administration
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