Demo

Senior Scientist, Protemics

SciPro
Boston, MA Full Time
POSTED ON 6/8/2026 CLOSED ON 6/16/2026

What are the responsibilities and job description for the Senior Scientist, Protemics position at SciPro?

We are seeking a Senior Scientist, Proteomics to help advance a next-generation chemical proteomics platform supporting drug discovery and target validation efforts. This individual will play a key role in developing and applying mass spectrometry-based proteomics workflows to generate biological insights, characterize compounds, and support biomarker discovery across multidisciplinary research programs.


Key Responsibilities

  • Develop, optimize, and execute targeted chemoproteomics and quantitative proteomics workflows.
  • Operate, maintain, and troubleshoot advanced LC-MS instrumentation, including Orbitrap-based platforms.
  • Design scalable sample preparation and experimental workflows to support high-throughput applications.
  • Analyze and interpret complex proteomics datasets using quantitative and statistical approaches.
  • Collaborate closely with biology, chemistry, computational, and platform teams to design experiments and guide project strategy.
  • Drive innovation in chemical proteomics technologies and methodologies to expand platform capabilities.
  • Present findings and recommendations to cross-functional stakeholders.


Qualifications

  • PhD in Analytical Chemistry, Chemical Biology, Biochemistry, or a related discipline with 4 years of industry experience, or MS with 6 years of relevant industry experience.
  • Deep expertise in mass spectrometry-based proteomics and LC-MS instrumentation.
  • Experience with quantitative proteomics approaches such as TMT, DIA, PRM, or related methods.
  • Strong background in targeted chemoproteomics and compound profiling applications.
  • Experience analyzing large-scale proteomics datasets using tools such as Proteome Discoverer, Spectronaut, MaxQuant, or MSFragger.
  • Proficiency with data analysis and scripting in Python and/or R.
  • Strong understanding of experimental design, assay development, and quantitative data interpretation.
  • Experience with peptide mapping, intact mass analysis, or laboratory automation platforms is a plus.
  • Demonstrated ability to work independently while collaborating effectively in a fast-paced discovery environment.


Preferred Expertise

  • Chemical proteomics
  • Quantitative proteomics
  • Mass spectrometry (LC-MS/MS)
  • Drug discovery and target validation
  • Biomarker discovery
  • Data analysis (Python, R)
  • Cross-functional scientific leadership

Salary.com Estimation for Senior Scientist, Protemics in Boston, MA
$119,244 to $143,682
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