Demo

Director, Small Molecule Discovery Biology (Inflammation & Autoimmunity)

alumis
San Francisco, CA Full Time
POSTED ON 7/24/2026
AVAILABLE BEFORE 9/23/2026

Alumis Inc. is a precision medicines company with the mission to transform the lives of patients with autoimmune diseases. Even with treatment innovations of the last two decades, many patients with immunologic conditions continue to suffer - our goal is to fundamentally change the outcomes for these patients. 

The Alumis team seeks a highly motivated Director in autoimmune discovery biology. The candidate should be well-versed in small molecule drug discovery and bring experience with a variety of target classes and modalities. The individual will take responsibility for important project-level biochemistry and biology efforts advancing our early portfolio of small molecule autoimmune therapies, as well as mentoring junior staff. The ideal candidate will bring expertise drawn from different areas of biology and immunology, such as biochemistry, pharmacology, cell biology, molecular biology, and chemical biology/proteomics. Prior experience will ideally span across the stages of drug discovery from lead finding through early clinical development.

Key Responsibilities:

  • Taking biology department responsibility in discovery-stage small molecule projects including conceptualizing project strategy, recognizing knowledge gaps, formulating screening paradigms, overseeing SAR generation, coordinating among project stakeholders, and identifying potential new targets
  • Overseeing development of both biochemical and cellular read-outs to support small molecule drug discovery efforts Support characterization of small molecule clinical candidates by employing autoimmune disease models and developing clinically relevant PD assays
  • Providing both direct and indirect supervision of laboratory-based biology staff
  • Manage external biology studies performed at CROs.
  • Collaborating effectively with cross-functional teams including medicinal chemistry, DMPK, and preclinical development.
  • Ensuring effective communication and coordination with departmental and company-wide leaders on project strategy and progress toward goals

Ideal candidate:

  • PhD with 8 years biopharma work experience in immunology-related small molecule drug discovery
  • Prior experience with function-level oversight of project biology and/or biochemistry efforts, or overall project team leadership
  • Knowledge of and hands on experience with emerging areas of small molecule drug discovery, such as protein-protein interaction inhibitors, degraders and molecular glues, and transcription factors
  • Expertise spanning from early-stage target discovery and validation through early clinical development
  • Awareness of methods for compound screening, characterizing mechanism of action, transcriptomics, and proteomics
  • Familiarity with autoimmune disease biology including in vitro and in vivo immunology models, immortalized cell lines, isolation and characterization of primary immune cells, RNA-Seq, and cytokine detection methodologies
  • Prior management of CRO collaborations, with an existing familiarity of a wide variety of biology CROs
  • Excellent interpersonal skills with the ability to work both independently and cross-functionally to advance drug discovery programs; experience working with academic collaborators is a plus.
  • Successful direct and indirect supervision of junior staff members
  • Familiarity and enthusiasm for working in a small company environment
  • Track record of scientific achievement and innovation

The salary range for this position is $200,000 USD to $240,000 USD annually. This salary range is an estimate, and the actual salary may very based on the Company’s compensation practices.  

Alumis compensation packages include generous stock option grants for all employees as well as an annual bonus program.  

Other benefits include:

  • Health insurance premiums paid at 90% for employee, 80% for dependents
  • Free access to Genentech Bus & Ferry Share program
  • $100 monthly cell phone stipend
  • Unlimited PTO for Exempt employees
  • Free onsite gym and a kitchen stocked with yummy snacks and drinks!

We are a hard-working, collaborative team on a mission to transform patient’s lives-- and we aspire to elevatechallenge and nurture one another along the way.

Alumis Inc. is an equal opportunity employer.

Salary : $200,000 - $240,000

If your compensation planning software is too rigid to deploy winning incentive strategies, it’s time to find an adaptable solution. Compensation Planning
Enhance your organization's compensation strategy with salary data sets that HR and team managers can use to pay your staff right. Surveys & Data Sets

What is the career path for a Director, Small Molecule Discovery Biology (Inflammation & Autoimmunity)?

Sign up to receive alerts about other jobs on the Director, Small Molecule Discovery Biology (Inflammation & Autoimmunity) career path by checking the boxes next to the positions that interest you.
Income Estimation: 
$182,395 - $259,283
Income Estimation: 
$218,260 - $307,506
Employees: Get a Salary Increase
View Core, Job Family, and Industry Job Skills and Competency Data for more than 15,000 Job Titles Skills Library

Job openings at alumis

  • alumis South San Francisco, CA
  • Alumis Inc. is a precision medicines company with the mission to transform the lives of patients with autoimmune diseases. Even with treatment innovations ... more
  • 8 Days Ago

  • alumis South San Francisco, CA
  • Alumis Inc. is a precision medicines company with the mission to transform the lives of patients with autoimmune diseases. Even with treatment innovations ... more
  • 9 Days Ago

  • alumis Kansas, MO
  • Alumis Inc. is a precision medicines company with the mission to transform the lives of patients with autoimmune diseases. Even with treatment innovations ... more
  • 11 Days Ago

  • alumis Houston, TX
  • Alumis Inc. is a precision medicines company with the mission to transform the lives of patients with autoimmune diseases. Even with treatment innovations ... more
  • 12 Days Ago


Not the job you're looking for? Here are some other Director, Small Molecule Discovery Biology (Inflammation & Autoimmunity) jobs in the San Francisco, CA area that may be a better fit.

  • Structure Therapeutics South San Francisco, CA
  • About Us Structure Therapeutics develops life‐changing medicines for patients using advanced structure‐based and computational drug discovery technology. T... more
  • 5 Days Ago

  • Amgen South San Francisco, CA
  • Director - PKDM - Small Molecule Portfolio Strategy & Leadership US - California - South San Francisco JOB ID: R-247807 LOCATION: US - California - South S... more
  • 21 Days Ago

AI Assistant is available now!

Feel free to start your new journey!